Cocona is an average middle schooler living with her grandmother. And she who has yet to decide a goal to strive for, soon met a strange girl named Papika who invites her to an organization called Flip Flap. Dragged along by the energetic stranger, Cocona finds herself in the world of Pure Illusion—a bizarre alternate dimension—helping Papika look for crystal shards. Upon completing their mission, Papika and Cocona are sent to yet another world in Pure Illusion. As a dangerous creature besets them, the girls use their crystals to transform into magical girls: Cocona into Pure Blade, and Papika into Pure Barrier. But as they try to defeat the creature before them, three others with powers from a rival organization enter the fray and slay the creature, taking with them a fragment left behind from its body. Afterward, the girls realize that to stand a chance against their rivals and the creatures in Pure Illusion, they must learn to work together and synchronize their feelings in order to transform more effectively. [Written by MAL Rewrite]

The story takes place on an island, where a "Fractale System" is beginning to collapse. One day, Clain finds an injured girl called Phryne under a cliff. She disappears leaving a pendant. Clain sets out for a journey with the girl-shaped avatar Nessa to look for Phryne and discovers the secret of the Fractale System.

Tanis, a child genius, is the youngest son of two mad scientists. His family has spent their lives withdrawn from normal society living on an isolated island, where the couple conducts experiments on Tanis' siblings that result in them gaining abnormal abilities. However, this activity is put to a stop when they are caught and arrested. Tanis is brought by government officials to a more populated island, alongside his four siblings: Snow, a dog-human hybrid; Ashise, a plant-human hybrid; Aisley, a spider-human hybrid; and Suishi, a mind-reader. Being the only one who has not been genetically modified, Tanis takes on the responsibility of adapting his siblings to society, all while trying to conceal their' distinctive characteristics. [Written by MAL Rewrite]

In the town of Kamisu 66, 12-year-old Saki Watanabe has just awakened to her psychic powers and is relieved to rejoin her friends—the mischievous Satoru Asahina, the shy Mamoru Itou, the cheerful Maria Akizuki, and Shun Aonuma, a mysterious boy whom Saki admires—at Sage Academy, a special school for psychics. However, unease looms as Saki begins to question the fate of those unable to awaken to their powers, and the children begin to get involved with secretive matters such as the rumored Tainted Cats said to abduct children. Shinsekai yori tells the unique coming-of-age story of Saki and her friends as they journey to grow into their roles in the supposed utopia. Accepting these roles, however, might not come easy when faced with the dark and shocking truths of society, and the impending havoc born from the new world. [Written by MAL Rewrite]