Based on the novel trilogy of the same name by MAYUMURA Taku (眉村 卓), Time Stranger is the story of a bunch of teenagers getting transported back in time through Japan's history, and getting mixed up with samurai shenanigans.

Continuing their journey from Record Country (the place that held the book of memories), Syaoran and company land into Tokyo Country, a blood-filled country under war from opposing factions for natural resources and survival. While reluctantly involved in the race to live, the group faces their own problems as certain revelations are made, changing their journey forever. A shocking betrayal and a battle that risks all of their lives. After this revelation, they will never be the same again.

U.C. 0097, one year after the opening of "Laplace's Box." Despite the revelation of the Universal Century Charter that acknowledges the existence and rights of Newtypes, the framework of the world has not been greatly altered. The conflict later dubbed the "Laplace Incident" is thought to have ended with the downfall of the Neo Zeon remnants known as the Sleeves. In its final battle, two full psycho-frame mobile suits displayed power beyond human understanding. The white unicorn and the black lion were sealed away to remove this danger from people's consciousness, and they should now be completely forgotten. However, the RX-0 Unicorn Gundam 03, which disappeared two years earlier, is now about to show itself in the Earth Sphere once more. A golden phoenix... named Phenex.

"Classes" are given at the age of 10, and the presence or absence of "skills" greatly affects life. Arel, the son of "Sword Princess" Fara and "Magic King" Leon, has been branded as "Classless"... But even without a job or skills, Arel believes he can persevere through effort.